Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lysmd1Q9D0E3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Gm15746-201ENSMUST00000120684 1027 ntBASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Mir1905-201ENSMUST00000122779 82 ntBASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Gm24328-201ENSMUST00000175104 67 ntBASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Gm37365-201ENSMUST00000193109 409 ntBASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Gm8574-201ENSMUST00000203207 924 ntBASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 CT025689.1-201ENSMUST00000225214 283 ntBASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 AC103672.1-201ENSMUST00000227502 365 ntBASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.09□□□□□ -0.31
Lysmd1Q9D0E3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.08□□□□□ -0.31
Lysmd1Q9D0E3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Lysmd1Q9D0E3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Lysmd1Q9D0E3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Lysmd1Q9D0E3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lysmd1Q9D0E3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Gm13827-201ENSMUST00000148801 372 ntBASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Gm5449-201ENSMUST00000081132 357 ntBASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.08□□□□□ -0.32
Lysmd1Q9D0E3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lysmd1Q9D0E3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms