Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Shmt2Q9CZN7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Gm8062-201ENSMUST00000139696 444 ntBASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Gm17420-201ENSMUST00000164753 153 ntBASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.83□□□□□ -0.52
Shmt2Q9CZN7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gm9630-201ENSMUST00000178304 885 ntBASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shmt2Q9CZN7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shmt2Q9CZN7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms