Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Gm9022-201ENSMUST00000182482 992 ntBASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Gm27243-201ENSMUST00000183964 521 ntBASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.73□□□□□ -0.37
Snf8Q9CZ28 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snf8Q9CZ28 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Gm11964-201ENSMUST00000120982 444 ntBASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Gm12138-201ENSMUST00000122180 951 ntBASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snf8Q9CZ28 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.71□□□□□ -0.37
Snf8Q9CZ28 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 291.8 ms