Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ddx47Q9CWX9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gm22121-201ENSMUST00000175148 54 ntBASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gm27838-201ENSMUST00000184829 128 ntBASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gm44882-201ENSMUST00000205702 802 ntBASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ddx47Q9CWX9 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ddx47Q9CWX9 Gm14057-201ENSMUST00000120631 482 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms