Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm18062-201ENSMUST00000208020 547 ntBASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gm18055-201ENSMUST00000208254 547 ntBASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Khdc3Q9CWU5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm23931-201ENSMUST00000103842 109 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm8018-201ENSMUST00000173536 789 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm44405-201ENSMUST00000198952 126 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm45925-201ENSMUST00000218882 744 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Khdc3Q9CWU5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Gm22018-201ENSMUST00000104357 131 ntBASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Gm11597-201ENSMUST00000121423 964 ntBASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.87□□□□□ -0.51
Khdc3Q9CWU5 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms