Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.06□□□□□ -0.48
Msh4Q99MT2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm15370-201ENSMUST00000117158 253 ntBASIC12.06□□□□□ -0.48
Msh4Q99MT2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm37489-201ENSMUST00000191883 159 ntBASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm9368-201ENSMUST00000219348 831 ntBASIC12.06□□□□□ -0.48
Msh4Q99MT2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Mir339-201ENSMUST00000083659 96 ntBASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.06□□□□□ -0.48
Msh4Q99MT2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.06□□□□□ -0.48
Msh4Q99MT2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Msh4Q99MT2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Msh4Q99MT2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.05□□□□□ -0.48
Msh4Q99MT2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm12241-201ENSMUST00000118330 726 ntBASIC12.05□□□□□ -0.48
Msh4Q99MT2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm43822-201ENSMUST00000200285 476 ntBASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm3961-201ENSMUST00000204425 994 ntBASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm6334-201ENSMUST00000207083 228 ntBASIC12.05□□□□□ -0.48
Msh4Q99MT2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm7046-201ENSMUST00000221351 977 ntBASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm8227-201ENSMUST00000223306 571 ntBASIC12.05□□□□□ -0.48
Msh4Q99MT2 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.05□□□□□ -0.48
Msh4Q99MT2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.05□□□□□ -0.48
Msh4Q99MT2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.05□□□□□ -0.48
Msh4Q99MT2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.05□□□□□ -0.48
Msh4Q99MT2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms