Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm12138-201ENSMUST00000122180 951 ntBASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Gm24196-201ENSMUST00000179161 110 ntBASIC11.66□□□□□ -0.54
Nkd1Q99MH6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Gm10012-201ENSMUST00000078252 192 ntBASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Nkd1Q99MH6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm15703-201ENSMUST00000120250 880 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm15806-201ENSMUST00000120696 955 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm12363-201ENSMUST00000122250 668 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm24644-201ENSMUST00000157114 139 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Rmrp-201ENSMUST00000157463 271 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm16296-201ENSMUST00000159905 325 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm4271-201ENSMUST00000174444 973 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm27331-201ENSMUST00000183705 60 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm27847-201ENSMUST00000183711 107 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm27375-201ENSMUST00000183799 107 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm27839-201ENSMUST00000184242 106 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm24526-201ENSMUST00000082921 158 ntBASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkd1Q99MH6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkd1Q99MH6 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Paupar-201ENSMUST00000194826 3482 ntBASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkd1Q99MH6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms