Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm23153-201ENSMUST00000175323 313 ntBASIC13.04□□□□□ -0.32
Clp1Q99LI9 Mir7076-201ENSMUST00000183519 74 ntBASIC13.04□□□□□ -0.32
Clp1Q99LI9 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.04□□□□□ -0.32
Clp1Q99LI9 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.04□□□□□ -0.32
Clp1Q99LI9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Clp1Q99LI9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clp1Q99LI9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.03□□□□□ -0.32
Clp1Q99LI9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Gm29155-201ENSMUST00000185910 269 ntBASIC13.03□□□□□ -0.32
Clp1Q99LI9 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Clp1Q99LI9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Clp1Q99LI9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clp1Q99LI9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.02□□□□□ -0.33
Clp1Q99LI9 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.02□□□□□ -0.33
Clp1Q99LI9 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clp1Q99LI9 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.02□□□□□ -0.33
Clp1Q99LI9 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.02□□□□□ -0.33
Clp1Q99LI9 Gm34023-201ENSMUST00000195539 217 ntBASIC13.02□□□□□ -0.33
Clp1Q99LI9 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.02□□□□□ -0.33
Clp1Q99LI9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clp1Q99LI9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Clp1Q99LI9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Clp1Q99LI9 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Clp1Q99LI9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Clp1Q99LI9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Clp1Q99LI9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clp1Q99LI9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Clp1Q99LI9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms