Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm23931-201ENSMUST00000103842 109 ntBASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm13392-201ENSMUST00000117708 150 ntBASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Mir1938-201ENSMUST00000158746 100 ntBASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm16379-201ENSMUST00000161469 348 ntBASIC11.98□□□□□ -0.49
Vmp1Q99KU0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm8762-201ENSMUST00000193486 339 ntBASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.98□□□□□ -0.49
Vmp1Q99KU0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Cog3-203ENSMUST00000227473 4197 ntBASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Gm12363-201ENSMUST00000122250 668 ntBASIC11.97□□□□□ -0.49
Vmp1Q99KU0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Gm27572-201ENSMUST00000183702 255 ntBASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Gm37008-201ENSMUST00000195712 319 ntBASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Gm19184-201ENSMUST00000196798 928 ntBASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vmp1Q99KU0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.97□□□□□ -0.49
Vmp1Q99KU0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Vmp1Q99KU0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vmp1Q99KU0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vmp1Q99KU0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vmp1Q99KU0 Map1b-203ENSMUST00000223725 2669 ntBASIC11.96□□□□□ -0.49
Vmp1Q99KU0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vmp1Q99KU0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vmp1Q99KU0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms