Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.28□□□□□ -0.6
Lims1Q99JW4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gm27847-201ENSMUST00000183711 107 ntBASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gm27375-201ENSMUST00000183799 107 ntBASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gm5035-201ENSMUST00000215581 927 ntBASIC11.28□□□□□ -0.6
Lims1Q99JW4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gm6091-201ENSMUST00000098307 165 ntBASIC11.28□□□□□ -0.6
Lims1Q99JW4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lims1Q99JW4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Lims1Q99JW4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.27□□□□□ -0.6
Lims1Q99JW4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.27□□□□□ -0.6
Lims1Q99JW4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lims1Q99JW4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lims1Q99JW4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lims1Q99JW4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lims1Q99JW4 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.27□□□□□ -0.6
Lims1Q99JW4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Lims1Q99JW4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lims1Q99JW4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lims1Q99JW4 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lims1Q99JW4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lims1Q99JW4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Lims1Q99JW4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.27□□□□□ -0.61
Lims1Q99JW4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.27□□□□□ -0.61
Lims1Q99JW4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.27□□□□□ -0.61
Lims1Q99JW4 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.27□□□□□ -0.61
Lims1Q99JW4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lims1Q99JW4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms