Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Clip1Q922J3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip1Q922J3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 Gm37131-201ENSMUST00000192502 1561 ntBASIC19.25■□□□□ 0.67
Clip1Q922J3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Clip1Q922J3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Clip1Q922J3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Clip1Q922J3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 Gm12029-201ENSMUST00000120073 832 ntBASIC19.25■□□□□ 0.67
Clip1Q922J3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Clip1Q922J3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 AC122876.1-201ENSMUST00000217619 825 ntBASIC19.25■□□□□ 0.67
Clip1Q922J3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC19.25■□□□□ 0.67
Clip1Q922J3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Clip1Q922J3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Clip1Q922J3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC19.25■□□□□ 0.67
Clip1Q922J3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clip1Q922J3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC19.25■□□□□ 0.67
Clip1Q922J3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clip1Q922J3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Clip1Q922J3 Gm14150-201ENSMUST00000122404 1354 ntBASIC19.24■□□□□ 0.67
Clip1Q922J3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC19.24■□□□□ 0.67
Clip1Q922J3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Clip1Q922J3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC19.24■□□□□ 0.67
Clip1Q922J3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Clip1Q922J3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Gm9387-201ENSMUST00000098624 1320 ntBASIC19.24■□□□□ 0.67
Clip1Q922J3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clip1Q922J3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Clip1Q922J3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC19.24■□□□□ 0.67
Clip1Q922J3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Clip1Q922J3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC19.23■□□□□ 0.67
Clip1Q922J3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC19.23■□□□□ 0.67
Clip1Q922J3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC19.23■□□□□ 0.67
Clip1Q922J3 Gm45266-201ENSMUST00000210111 2173 ntBASIC19.23■□□□□ 0.67
Clip1Q922J3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Clip1Q922J3 Gm43267-201ENSMUST00000199664 1796 ntBASIC19.23■□□□□ 0.67
Clip1Q922J3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC19.23■□□□□ 0.67
Clip1Q922J3 Gm10152-201ENSMUST00000193475 1344 ntBASIC19.23■□□□□ 0.67
Clip1Q922J3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clip1Q922J3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip1Q922J3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC19.22■□□□□ 0.67
Clip1Q922J3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC19.22■□□□□ 0.67
Clip1Q922J3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC19.22■□□□□ 0.67
Clip1Q922J3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC19.22■□□□□ 0.67
Clip1Q922J3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC19.22■□□□□ 0.67
Clip1Q922J3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Gm10752-201ENSMUST00000218348 729 ntBASIC19.22■□□□□ 0.67
Clip1Q922J3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Clip1Q922J3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Clip1Q922J3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Clip1Q922J3 Gm9129-201ENSMUST00000218173 1689 ntBASIC19.22■□□□□ 0.67
Clip1Q922J3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC19.22■□□□□ 0.67
Clip1Q922J3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip1Q922J3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms