Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha3Q91Y16 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm12058-201ENSMUST00000118614 437 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm2991-201ENSMUST00000173338 480 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm26956-201ENSMUST00000182176 986 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Mir8109-201ENSMUST00000184375 117 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm21769-201ENSMUST00000211922 111 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Cts7-204ENSMUST00000225321 1257 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdha3Q91Y16 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdha3Q91Y16 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.96□□□□□ -0.34
Pcdha3Q91Y16 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdha3Q91Y16 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pcdha3Q91Y16 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdha3Q91Y16 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdha3Q91Y16 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Gm27390-201ENSMUST00000184516 176 ntBASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdha3Q91Y16 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms