Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Gm26203-201ENSMUST00000082911 114 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Rubie-203ENSMUST00000227803 2430 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm11850-201ENSMUST00000119679 479 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm25047-201ENSMUST00000122667 104 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm26185-201ENSMUST00000157692 266 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm10012-202ENSMUST00000170379 372 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm23617-201ENSMUST00000175410 95 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm29543-201ENSMUST00000188138 967 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm43036-201ENSMUST00000200594 373 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 AL929555.1-201ENSMUST00000215283 509 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Cd40lg-201ENSMUST00000033466 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Krtap6-3-201ENSMUST00000079151 444 ntBASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 AC116589.5-201ENSMUST00000222230 1660 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Snx7-205ENSMUST00000198499 1314 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb20Q91XZ9 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdhb20Q91XZ9 Gm11245-201ENSMUST00000119419 1037 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms