Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb6Q91XZ4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Gm24934-201ENSMUST00000103764 111 ntBASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Gm25214-201ENSMUST00000104573 129 ntBASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Gm14127-201ENSMUST00000117906 678 ntBASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Gm14832-201ENSMUST00000121289 322 ntBASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Gm24845-201ENSMUST00000158034 109 ntBASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Gm27572-201ENSMUST00000183702 255 ntBASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Gm10478-201ENSMUST00000084451 396 ntBASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb6Q91XZ4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Gm4986-201ENSMUST00000119731 549 ntBASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb6Q91XZ4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb6Q91XZ4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms