Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Gm12058-201ENSMUST00000118614 437 ntBASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhgc5Q91XW9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Gm24749-201ENSMUST00000157838 343 ntBASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Gm44651-201ENSMUST00000207343 372 ntBASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdhgc5Q91XW9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Gm13611-201ENSMUST00000118269 318 ntBASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Gm13492-201ENSMUST00000119772 665 ntBASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhgc5Q91XW9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Gm12616-201ENSMUST00000118594 382 ntBASIC14.13□□□□□ -0.15
Pcdhgc5Q91XW9 Gm13736-201ENSMUST00000119272 253 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms