Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.58□□□□□ -0.4
Lims2Q91XD2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Gm7857-201ENSMUST00000117957 358 ntBASIC12.58□□□□□ -0.4
Lims2Q91XD2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.58□□□□□ -0.4
Lims2Q91XD2 Gm270-201ENSMUST00000223010 976 ntBASIC12.58□□□□□ -0.4
Lims2Q91XD2 Gm8385-201ENSMUST00000058999 643 ntBASIC12.58□□□□□ -0.4
Lims2Q91XD2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Lims2Q91XD2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.57□□□□□ -0.4
Lims2Q91XD2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Gm16505-201ENSMUST00000179981 232 ntBASIC12.57□□□□□ -0.4
Lims2Q91XD2 Gm8343-201ENSMUST00000182705 994 ntBASIC12.57□□□□□ -0.4
Lims2Q91XD2 Gm27627-201ENSMUST00000183644 150 ntBASIC12.57□□□□□ -0.4
Lims2Q91XD2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lims2Q91XD2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Gm4909-201ENSMUST00000118749 794 ntBASIC12.56□□□□□ -0.4
Lims2Q91XD2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lims2Q91XD2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms