Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.14□□□□□ -0.15
Trex1Q91XB0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trex1Q91XB0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Gm37835-201ENSMUST00000193305 361 ntBASIC14.13□□□□□ -0.15
Trex1Q91XB0 Gm18711-201ENSMUST00000199341 750 ntBASIC14.13□□□□□ -0.15
Trex1Q91XB0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.13□□□□□ -0.15
Trex1Q91XB0 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.13□□□□□ -0.15
Trex1Q91XB0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.13□□□□□ -0.15
Trex1Q91XB0 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.13□□□□□ -0.15
Trex1Q91XB0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trex1Q91XB0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Gm4157-201ENSMUST00000211647 679 ntBASIC14.12□□□□□ -0.15
Trex1Q91XB0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trex1Q91XB0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.11□□□□□ -0.15
Trex1Q91XB0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Gm26286-201ENSMUST00000104166 134 ntBASIC14.11□□□□□ -0.15
Trex1Q91XB0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Gm11511-201ENSMUST00000118146 540 ntBASIC14.11□□□□□ -0.15
Trex1Q91XB0 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Gm12164-201ENSMUST00000121695 551 ntBASIC14.11□□□□□ -0.15
Trex1Q91XB0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.11□□□□□ -0.15
Trex1Q91XB0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Gm8343-201ENSMUST00000182705 994 ntBASIC14.11□□□□□ -0.15
Trex1Q91XB0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.11□□□□□ -0.15
Trex1Q91XB0 Gm5051-201ENSMUST00000204085 485 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms