Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Gm12058-201ENSMUST00000118614 437 ntBASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Gm12997-201ENSMUST00000120207 640 ntBASIC14.24□□□□□ -0.13
Ddx41Q91VN6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ddx41Q91VN6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Gm16570-201ENSMUST00000161951 436 ntBASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Gm44405-201ENSMUST00000198952 126 ntBASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.23□□□□□ -0.13
Ddx41Q91VN6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Gm11930-201ENSMUST00000117788 190 ntBASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Gm13736-201ENSMUST00000119272 253 ntBASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Gm16296-201ENSMUST00000159905 325 ntBASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.22□□□□□ -0.13
Ddx41Q91VN6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Mir3102-201ENSMUST00000175555 104 ntBASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Gm13097-201ENSMUST00000210722 397 ntBASIC14.22□□□□□ -0.13
Ddx41Q91VN6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx41Q91VN6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms