Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Gm15824-201ENSMUST00000119516 955 ntBASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Gm11591-201ENSMUST00000120063 702 ntBASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Daam2-202ENSMUST00000224595 1926 ntBASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
H1fooQ8VIK3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm7809-201ENSMUST00000153199 742 ntBASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm8018-201ENSMUST00000173536 789 ntBASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm6222-202ENSMUST00000182143 629 ntBASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm9022-201ENSMUST00000182482 992 ntBASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm5745-201ENSMUST00000183748 313 ntBASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm6007-201ENSMUST00000208170 823 ntBASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm45925-201ENSMUST00000218882 744 ntBASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
H1fooQ8VIK3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms