Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.79□□□□□ -0.36
Trim60Q8VI40 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm8018-201ENSMUST00000173536 789 ntBASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm4034-201ENSMUST00000187674 480 ntBASIC12.79□□□□□ -0.36
Trim60Q8VI40 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm45930-201ENSMUST00000221330 292 ntBASIC12.79□□□□□ -0.36
Trim60Q8VI40 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.79□□□□□ -0.36
Trim60Q8VI40 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.79□□□□□ -0.36
Trim60Q8VI40 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.79□□□□□ -0.36
Trim60Q8VI40 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.79□□□□□ -0.36
Trim60Q8VI40 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.79□□□□□ -0.36
Trim60Q8VI40 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.78□□□□□ -0.36
Trim60Q8VI40 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.78□□□□□ -0.36
Trim60Q8VI40 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Gm12490-201ENSMUST00000120255 560 ntBASIC12.78□□□□□ -0.36
Trim60Q8VI40 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Gm7029-201ENSMUST00000173226 450 ntBASIC12.78□□□□□ -0.36
Trim60Q8VI40 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Gm29649-201ENSMUST00000185649 419 ntBASIC12.78□□□□□ -0.36
Trim60Q8VI40 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Gm5904-201ENSMUST00000210286 865 ntBASIC12.78□□□□□ -0.36
Trim60Q8VI40 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.78□□□□□ -0.36
Trim60Q8VI40 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim60Q8VI40 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms