Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rprd1aQ8VDS4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rprd1aQ8VDS4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Gm15547-201ENSMUST00000122152 333 ntBASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Rprd1aQ8VDS4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm22323-201ENSMUST00000103832 109 ntBASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm14760-201ENSMUST00000121831 999 ntBASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm28882-201ENSMUST00000185504 314 ntBASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm18304-201ENSMUST00000189162 546 ntBASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rprd1aQ8VDS4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rprd1aQ8VDS4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms