Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Rnf8Q8VC56 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Mir686-201ENSMUST00000102174 109 ntBASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Gm16177-201ENSMUST00000120728 718 ntBASIC11.98□□□□□ -0.49
Rnf8Q8VC56 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf8Q8VC56 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Gm12742-201ENSMUST00000117326 410 ntBASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Gm26185-201ENSMUST00000157692 266 ntBASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf8Q8VC56 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf8Q8VC56 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf8Q8VC56 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf8Q8VC56 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf8Q8VC56 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf8Q8VC56 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf8Q8VC56 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Rnf8Q8VC56 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf8Q8VC56 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf8Q8VC56 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms