Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Gm2991-201ENSMUST00000173338 480 ntBASIC13.57□□□□□ -0.24
Rpap2Q8VC34 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rpap2Q8VC34 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.56□□□□□ -0.24
Rpap2Q8VC34 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Gm38266-201ENSMUST00000194931 421 ntBASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Gm6334-201ENSMUST00000207083 228 ntBASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Gm45865-201ENSMUST00000211815 945 ntBASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rpap2Q8VC34 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Rpap2Q8VC34 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms