Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm27243-201ENSMUST00000183964 521 ntBASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.39□□□□□ -0.43
Vps39Q8R5L3 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Gm22058-201ENSMUST00000083393 310 ntBASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.39□□□□□ -0.43
Vps39Q8R5L3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.39□□□□□ -0.43
Vps39Q8R5L3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm11424-201ENSMUST00000121929 829 ntBASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm16379-201ENSMUST00000161469 348 ntBASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm8762-201ENSMUST00000193486 339 ntBASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm44405-201ENSMUST00000198952 126 ntBASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm42599-201ENSMUST00000201308 469 ntBASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm44882-201ENSMUST00000205702 802 ntBASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps39Q8R5L3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps39Q8R5L3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms