Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx54Q8K4L0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Gm18198-201ENSMUST00000204986 1551 ntBASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Mir671-201ENSMUST00000102432 98 ntBASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Gm18201-201ENSMUST00000174735 875 ntBASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Gm5380-201ENSMUST00000119296 2136 ntBASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Gm43267-201ENSMUST00000199664 1796 ntBASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx54Q8K4L0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm14942-201ENSMUST00000119642 336 ntBASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm12030-201ENSMUST00000121917 223 ntBASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm9135-201ENSMUST00000182963 990 ntBASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm44953-201ENSMUST00000208745 1286 ntBASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Lgi3-203ENSMUST00000226548 1001 ntBASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 AC165154.1-201ENSMUST00000226661 340 ntBASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm5537-201ENSMUST00000091117 1252 ntBASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx54Q8K4L0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Ddx54Q8K4L0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx54Q8K4L0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx54Q8K4L0 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.08■□□□□ 0.17
Ddx54Q8K4L0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx54Q8K4L0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx54Q8K4L0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ddx54Q8K4L0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms