Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Gm37028-201ENSMUST00000194276 107 ntBASIC13.96□□□□□ -0.17
Syne4Q8CII8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.96□□□□□ -0.17
Syne4Q8CII8 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Syne4Q8CII8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syne4Q8CII8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syne4Q8CII8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syne4Q8CII8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Syne4Q8CII8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Syne4Q8CII8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Mir6998-201ENSMUST00000183343 64 ntBASIC13.95□□□□□ -0.18
Syne4Q8CII8 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.95□□□□□ -0.18
Syne4Q8CII8 Gm37299-201ENSMUST00000193951 826 ntBASIC13.95□□□□□ -0.18
Syne4Q8CII8 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.95□□□□□ -0.18
Syne4Q8CII8 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Gm45575-201ENSMUST00000210283 548 ntBASIC13.95□□□□□ -0.18
Syne4Q8CII8 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.95□□□□□ -0.18
Syne4Q8CII8 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.95□□□□□ -0.18
Syne4Q8CII8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.95□□□□□ -0.18
Syne4Q8CII8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Syne4Q8CII8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.95□□□□□ -0.18
Syne4Q8CII8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.94□□□□□ -0.18
Syne4Q8CII8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Gm1848-201ENSMUST00000120711 789 ntBASIC13.94□□□□□ -0.18
Syne4Q8CII8 Gm15566-201ENSMUST00000121130 590 ntBASIC13.94□□□□□ -0.18
Syne4Q8CII8 Gm18711-201ENSMUST00000199341 750 ntBASIC13.94□□□□□ -0.18
Syne4Q8CII8 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.94□□□□□ -0.18
Syne4Q8CII8 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.94□□□□□ -0.18
Syne4Q8CII8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Syne4Q8CII8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Syne4Q8CII8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.93□□□□□ -0.18
Syne4Q8CII8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms