Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Mir877-201ENSMUST00000104738 85 ntBASIC12.67□□□□□ -0.38
CopaQ8CIE6 Gm11964-201ENSMUST00000120982 444 ntBASIC12.67□□□□□ -0.38
CopaQ8CIE6 Gm17376-201ENSMUST00000166016 84 ntBASIC12.67□□□□□ -0.38
CopaQ8CIE6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.67□□□□□ -0.38
CopaQ8CIE6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.67□□□□□ -0.38
CopaQ8CIE6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopaQ8CIE6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.67□□□□□ -0.38
CopaQ8CIE6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CopaQ8CIE6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.67□□□□□ -0.38
CopaQ8CIE6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CopaQ8CIE6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.66□□□□□ -0.38
CopaQ8CIE6 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.66□□□□□ -0.38
CopaQ8CIE6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.66□□□□□ -0.38
CopaQ8CIE6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.66□□□□□ -0.38
CopaQ8CIE6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CopaQ8CIE6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Gm10434-201ENSMUST00000101158 471 ntBASIC12.65□□□□□ -0.38
CopaQ8CIE6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Gm11222-201ENSMUST00000119005 738 ntBASIC12.65□□□□□ -0.38
CopaQ8CIE6 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Gm20482-202ENSMUST00000174729 825 ntBASIC12.65□□□□□ -0.38
CopaQ8CIE6 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.65□□□□□ -0.38
CopaQ8CIE6 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.65□□□□□ -0.38
CopaQ8CIE6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.65□□□□□ -0.38
CopaQ8CIE6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.65□□□□□ -0.38
CopaQ8CIE6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CopaQ8CIE6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms