Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Gm12742-201ENSMUST00000117326 410 ntBASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Gm22121-201ENSMUST00000175148 54 ntBASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Gm37497-201ENSMUST00000195830 798 ntBASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc87Q8CDL9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccdc87Q8CDL9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Gm24231-201ENSMUST00000104315 133 ntBASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Gm13123-201ENSMUST00000122173 492 ntBASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Snora78-201ENSMUST00000158630 128 ntBASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc87Q8CDL9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms