Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Gm22323-201ENSMUST00000103832 109 ntBASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Dhrs4-202ENSMUST00000226168 828 ntBASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Gm18626-201ENSMUST00000221512 1409 ntBASIC15.76■□□□□ 0.11
Ccdc60Q8C4J0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Gm14381-201ENSMUST00000122105 414 ntBASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Mir6420-201ENSMUST00000185032 102 ntBASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
Ccdc60Q8C4J0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Gm11930-201ENSMUST00000117788 190 ntBASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Gm3096-201ENSMUST00000185770 364 ntBASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.74■□□□□ 0.11
Ccdc60Q8C4J0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccdc60Q8C4J0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms