Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gm27572-201ENSMUST00000183702 255 ntBASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gm42627-201ENSMUST00000197347 224 ntBASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gm7046-201ENSMUST00000221351 977 ntBASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.75□□□□□ -0.37
Trub1Q8C0D0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Gm4986-201ENSMUST00000119731 549 ntBASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.74□□□□□ -0.37
Trub1Q8C0D0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Gm5950-201ENSMUST00000213337 772 ntBASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Morn2-202ENSMUST00000227729 656 ntBASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trub1Q8C0D0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Gm24830-201ENSMUST00000102024 166 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Gm13392-201ENSMUST00000117708 150 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Gm17420-201ENSMUST00000164753 153 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Gm28882-201ENSMUST00000185504 314 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Gm29396-201ENSMUST00000185659 716 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Olfr284-202ENSMUST00000206647 966 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Gm26232-201ENSMUST00000083360 166 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trub1Q8C0D0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms