Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Gm12380-201ENSMUST00000119012 544 ntBASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Gm12266-201ENSMUST00000120311 962 ntBASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Gm23949-201ENSMUST00000104027 127 ntBASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Gm15711-201ENSMUST00000118889 535 ntBASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Gm5616-201ENSMUST00000165252 384 ntBASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Gm8741-201ENSMUST00000174736 384 ntBASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sh3rf2Q8BZT2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Gm28071-201ENSMUST00000190355 478 ntBASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sh3rf2Q8BZT2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf2Q8BZT2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Sh3rf2Q8BZT2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sh3rf2Q8BZT2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms