Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm11Q8BUV6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Lsm11Q8BUV6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm11Q8BUV6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Lsm11Q8BUV6 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Gm28438-201ENSMUST00000188299 345 ntBASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Gm37213-201ENSMUST00000193077 586 ntBASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Gm20949-201ENSMUST00000206478 952 ntBASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Lsm11Q8BUV6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Gm14704-201ENSMUST00000120300 874 ntBASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Gm18307-201ENSMUST00000206864 949 ntBASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Gm6218-201ENSMUST00000219812 628 ntBASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 AC117797.1-201ENSMUST00000223977 695 ntBASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.67□□□□□ -0.7
Lsm11Q8BUV6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms