Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gm16202-201ENSMUST00000117532 544 ntBASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gm9630-201ENSMUST00000178304 885 ntBASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smco3Q8BQM7 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Mir686-201ENSMUST00000102174 109 ntBASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Gm14701-201ENSMUST00000117156 348 ntBASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Gm13813-201ENSMUST00000120998 787 ntBASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.18□□□□□ -0.78
Smco3Q8BQM7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.18□□□□□ -0.78
Smco3Q8BQM7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Gm9063-201ENSMUST00000223299 582 ntBASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smco3Q8BQM7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms