Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 AC159376.1-201ENSMUST00000218504 630 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm5451-201ENSMUST00000080545 579 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Olfr584-201ENSMUST00000098210 964 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm37348-201ENSMUST00000193104 1789 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm15784-201ENSMUST00000120260 1462 ntBASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col16a1Q8BLX7 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gm13022-201ENSMUST00000121181 285 ntBASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 AC168279.1-201ENSMUST00000214611 382 ntBASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 AC102368.1-201ENSMUST00000227161 892 ntBASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gm23680-201ENSMUST00000083162 164 ntBASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Ap3s1-202ENSMUST00000224622 978 ntBASIC15.92■□□□□ 0.14
Col16a1Q8BLX7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Gm7541-201ENSMUST00000118361 535 ntBASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Gm9136-201ENSMUST00000193368 454 ntBASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Gm5298-201ENSMUST00000201122 892 ntBASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Gm45410-201ENSMUST00000211331 1093 ntBASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 AC126799.1-201ENSMUST00000221976 246 ntBASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col16a1Q8BLX7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 AC166836.1-201ENSMUST00000219933 1795 ntBASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.9■□□□□ 0.14
Col16a1Q8BLX7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms