Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Slc5a7Q8BGY9 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Gm20445-201ENSMUST00000061905 565 ntBASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Gm16372-201ENSMUST00000073088 450 ntBASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Slc5a7Q8BGY9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Gm23363-201ENSMUST00000175024 79 ntBASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Gm44882-201ENSMUST00000205702 802 ntBASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Slc5a7Q8BGY9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms