Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim50Q810I2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim50Q810I2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim50Q810I2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Gm10434-201ENSMUST00000101158 471 ntBASIC12.06□□□□□ -0.48
Trim50Q810I2 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.06□□□□□ -0.48
Trim50Q810I2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim50Q810I2 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.06□□□□□ -0.48
Trim50Q810I2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Gm6007-201ENSMUST00000208170 823 ntBASIC12.06□□□□□ -0.48
Trim50Q810I2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim50Q810I2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim50Q810I2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim50Q810I2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim50Q810I2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Gm29396-201ENSMUST00000185659 716 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 Gm18304-201ENSMUST00000189162 546 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 Olfr284-202ENSMUST00000206647 966 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 Gm6013-201ENSMUST00000212264 699 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Gm7046-201ENSMUST00000221351 977 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 Gm10076-201ENSMUST00000073238 384 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.05□□□□□ -0.48
Trim50Q810I2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim50Q810I2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim50Q810I2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Trim50Q810I2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim50Q810I2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim50Q810I2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Trim50Q810I2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim50Q810I2 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.04□□□□□ -0.48
Trim50Q810I2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim50Q810I2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim50Q810I2 Gm23119-201ENSMUST00000158610 140 ntBASIC12.04□□□□□ -0.48
Trim50Q810I2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trim50Q810I2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim50Q810I2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trim50Q810I2 Gm2546-201ENSMUST00000182630 991 ntBASIC12.04□□□□□ -0.48
Trim50Q810I2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim50Q810I2 Gm37201-201ENSMUST00000191845 523 ntBASIC12.04□□□□□ -0.48
Trim50Q810I2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim50Q810I2 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms