Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm24548-201ENSMUST00000158650 108 ntBASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Gm27514-201ENSMUST00000183692 110 ntBASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Gm5745-201ENSMUST00000183748 313 ntBASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.14□□□□□ -0.47
Ccdc116Q80X53 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Gm5781-201ENSMUST00000219792 443 ntBASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Gm45930-201ENSMUST00000221330 292 ntBASIC12.14□□□□□ -0.47
Ccdc116Q80X53 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc116Q80X53 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Gm13829-201ENSMUST00000119600 138 ntBASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Gm13342-201ENSMUST00000121055 207 ntBASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Gm13316-201ENSMUST00000140537 691 ntBASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Gm5904-201ENSMUST00000210286 865 ntBASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc116Q80X53 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc116Q80X53 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms