Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Gm15703-201ENSMUST00000120250 880 ntBASIC11.85□□□□□ -0.51
Vrk1Q80X41 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Gm20426-201ENSMUST00000173657 440 ntBASIC11.85□□□□□ -0.51
Vrk1Q80X41 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Gm37666-201ENSMUST00000194110 866 ntBASIC11.85□□□□□ -0.51
Vrk1Q80X41 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.85□□□□□ -0.51
Vrk1Q80X41 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.85□□□□□ -0.51
Vrk1Q80X41 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Vrk1Q80X41 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.84□□□□□ -0.51
Vrk1Q80X41 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Gm5523-201ENSMUST00000180415 997 ntBASIC11.84□□□□□ -0.51
Vrk1Q80X41 Gm27627-201ENSMUST00000183644 150 ntBASIC11.84□□□□□ -0.51
Vrk1Q80X41 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Vrk1Q80X41 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.83□□□□□ -0.52
Vrk1Q80X41 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.83□□□□□ -0.52
Vrk1Q80X41 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Gm24514-201ENSMUST00000174961 285 ntBASIC11.83□□□□□ -0.52
Vrk1Q80X41 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.83□□□□□ -0.52
Vrk1Q80X41 Gm9230-201ENSMUST00000188228 532 ntBASIC11.83□□□□□ -0.52
Vrk1Q80X41 Gm42937-201ENSMUST00000197360 752 ntBASIC11.83□□□□□ -0.52
Vrk1Q80X41 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.83□□□□□ -0.52
Vrk1Q80X41 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vrk1Q80X41 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms