Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm13315-201ENSMUST00000120376 991 ntBASIC13.56□□□□□ -0.24
Ush1gQ80T11 Gm14832-201ENSMUST00000121289 322 ntBASIC13.56□□□□□ -0.24
Ush1gQ80T11 Gm11597-201ENSMUST00000121423 964 ntBASIC13.56□□□□□ -0.24
Ush1gQ80T11 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.56□□□□□ -0.24
Ush1gQ80T11 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.56□□□□□ -0.24
Ush1gQ80T11 Gm19187-201ENSMUST00000206781 892 ntBASIC13.56□□□□□ -0.24
Ush1gQ80T11 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ush1gQ80T11 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Rmrp-201ENSMUST00000157463 271 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm9211-201ENSMUST00000182882 975 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Mir7032-201ENSMUST00000185154 79 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm7467-201ENSMUST00000185173 652 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm29615-201ENSMUST00000185371 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm28882-201ENSMUST00000185504 314 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm28224-201ENSMUST00000186078 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm29001-201ENSMUST00000186177 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm28292-201ENSMUST00000186593 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm28101-201ENSMUST00000187608 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm29076-201ENSMUST00000187689 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm28302-201ENSMUST00000187931 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm28646-201ENSMUST00000188220 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm28205-201ENSMUST00000189177 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm29032-201ENSMUST00000189797 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm28695-201ENSMUST00000190300 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm37448-201ENSMUST00000192795 697 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm45118-201ENSMUST00000208928 825 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.55□□□□□ -0.24
Ush1gQ80T11 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ush1gQ80T11 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Gm18734-201ENSMUST00000172937 808 ntBASIC13.54□□□□□ -0.24
Ush1gQ80T11 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Gm27627-201ENSMUST00000183644 150 ntBASIC13.54□□□□□ -0.24
Ush1gQ80T11 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.54□□□□□ -0.24
Ush1gQ80T11 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Ush1gQ80T11 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms