Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm15352-201ENSMUST00000118696 270 ntBASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm13888-201ENSMUST00000119148 422 ntBASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm15782-201ENSMUST00000121073 445 ntBASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm14441-201ENSMUST00000121960 540 ntBASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm10807-201ENSMUST00000177134 795 ntBASIC14.34□□□□□ -0.11
Nup98Q6PFD9 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup98Q6PFD9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nup98Q6PFD9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Nup98Q6PFD9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup98Q6PFD9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nup98Q6PFD9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nup98Q6PFD9 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Gm24891-201ENSMUST00000104391 136 ntBASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Gm6114-201ENSMUST00000182472 968 ntBASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Gm37905-201ENSMUST00000195310 341 ntBASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nup98Q6PFD9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 n-R5s84-201ENSMUST00000122591 109 ntBASIC14.32□□□□□ -0.12
Nup98Q6PFD9 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Mir1956-201ENSMUST00000157748 65 ntBASIC14.32□□□□□ -0.12
Nup98Q6PFD9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Gm27438-201ENSMUST00000183480 110 ntBASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Gm28937-201ENSMUST00000185413 695 ntBASIC14.32□□□□□ -0.12
Nup98Q6PFD9 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Gm29400-201ENSMUST00000187208 695 ntBASIC14.32□□□□□ -0.12
Nup98Q6PFD9 Gm28662-201ENSMUST00000188446 695 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms