Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm34023-201ENSMUST00000195539 217 ntBASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm17831-201ENSMUST00000205579 900 ntBASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Gm4607-201ENSMUST00000206649 577 ntBASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.88□□□□□ -0.67
Snrnp40Q6PE01 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm11956-201ENSMUST00000119525 512 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm7722-201ENSMUST00000120646 741 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm14585-201ENSMUST00000120713 634 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm11246-201ENSMUST00000120880 345 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm22144-201ENSMUST00000157402 102 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm28686-201ENSMUST00000187404 609 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Snora73b-201ENSMUST00000083419 205 ntBASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Snrnp40Q6PE01 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Gm26286-201ENSMUST00000104166 134 ntBASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Gm11511-201ENSMUST00000118146 540 ntBASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Gm25072-201ENSMUST00000175233 235 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms