Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Gm11524-201ENSMUST00000119349 807 ntBASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf220Q6PDX6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gm15487-201ENSMUST00000122373 465 ntBASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gm24694-201ENSMUST00000180054 110 ntBASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gm27989-201ENSMUST00000184721 107 ntBASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gm27663-201ENSMUST00000184839 110 ntBASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gm43094-201ENSMUST00000196549 921 ntBASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rnf220Q6PDX6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Gm15376-201ENSMUST00000122258 783 ntBASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Rnf220Q6PDX6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms