Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Casc4Q6P2L7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm12241-201ENSMUST00000118330 726 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm11597-201ENSMUST00000121423 964 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm2991-201ENSMUST00000173338 480 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm2546-201ENSMUST00000182630 991 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Mir8109-201ENSMUST00000184375 117 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm38266-201ENSMUST00000194931 421 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm44124-201ENSMUST00000204159 472 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm6007-201ENSMUST00000208170 823 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Gm9368-201ENSMUST00000219348 831 ntBASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Casc4Q6P2L7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm15198-201ENSMUST00000117283 177 ntBASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm11222-201ENSMUST00000119005 738 ntBASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm13736-201ENSMUST00000119272 253 ntBASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm13297-201ENSMUST00000120205 934 ntBASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Gm13315-201ENSMUST00000120376 991 ntBASIC12.54□□□□□ -0.4
Casc4Q6P2L7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms