Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Gm24644-201ENSMUST00000157114 139 ntBASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Krt39Q6IFX4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.66□□□□□ -0.22
Krt39Q6IFX4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Krt39Q6IFX4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Cog3-203ENSMUST00000227473 4197 ntBASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Gm44882-201ENSMUST00000205702 802 ntBASIC13.65□□□□□ -0.22
Krt39Q6IFX4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms