Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scube3Q66PY1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.14□□□□□ -0.31
Scube3Q66PY1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Gm12314-201ENSMUST00000118104 538 ntBASIC13.14□□□□□ -0.31
Scube3Q66PY1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Gm7584-201ENSMUST00000175829 940 ntBASIC13.14□□□□□ -0.31
Scube3Q66PY1 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Gm18304-201ENSMUST00000189162 546 ntBASIC13.14□□□□□ -0.31
Scube3Q66PY1 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scube3Q66PY1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.13□□□□□ -0.31
Scube3Q66PY1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.13□□□□□ -0.31
Scube3Q66PY1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gm14726-201ENSMUST00000120623 896 ntBASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gm13570-201ENSMUST00000140763 309 ntBASIC13.13□□□□□ -0.31
Scube3Q66PY1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Ap1g1-206ENSMUST00000179104 1096 ntBASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gm37466-201ENSMUST00000195692 652 ntBASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.13□□□□□ -0.31
Scube3Q66PY1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.13□□□□□ -0.31
Scube3Q66PY1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms