Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.41□□□□□ -0.58
AtmQ62388 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.41□□□□□ -0.58
AtmQ62388 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.41□□□□□ -0.58
AtmQ62388 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
AtmQ62388 Gm23680-201ENSMUST00000083162 164 ntBASIC11.41□□□□□ -0.58
AtmQ62388 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.41□□□□□ -0.58
AtmQ62388 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
AtmQ62388 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
AtmQ62388 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC11.4□□□□□ -0.58
AtmQ62388 Gm5705-201ENSMUST00000066241 711 ntBASIC11.4□□□□□ -0.58
AtmQ62388 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
AtmQ62388 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
AtmQ62388 Gm24954-201ENSMUST00000178831 110 ntBASIC11.4□□□□□ -0.58
AtmQ62388 Gm9625-201ENSMUST00000180422 955 ntBASIC11.4□□□□□ -0.58
AtmQ62388 Gm29499-201ENSMUST00000189151 486 ntBASIC11.4□□□□□ -0.58
AtmQ62388 Gm28329-201ENSMUST00000191208 689 ntBASIC11.4□□□□□ -0.58
AtmQ62388 Gm29171-201ENSMUST00000191397 486 ntBASIC11.4□□□□□ -0.58
AtmQ62388 Gm8197-202ENSMUST00000193422 934 ntBASIC11.4□□□□□ -0.58
AtmQ62388 Gm2345-201ENSMUST00000193451 589 ntBASIC11.4□□□□□ -0.58
AtmQ62388 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.4□□□□□ -0.58
AtmQ62388 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.4□□□□□ -0.58
AtmQ62388 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
AtmQ62388 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.4□□□□□ -0.58
AtmQ62388 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
AtmQ62388 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
AtmQ62388 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
AtmQ62388 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
AtmQ62388 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.39□□□□□ -0.59
AtmQ62388 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.39□□□□□ -0.59
AtmQ62388 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.39□□□□□ -0.59
AtmQ62388 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.39□□□□□ -0.59
AtmQ62388 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
AtmQ62388 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.39□□□□□ -0.59
AtmQ62388 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
AtmQ62388 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.39□□□□□ -0.59
AtmQ62388 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
AtmQ62388 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
AtmQ62388 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.39□□□□□ -0.59
AtmQ62388 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.39□□□□□ -0.59
AtmQ62388 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.39□□□□□ -0.59
AtmQ62388 Gm34379-201ENSMUST00000195036 290 ntBASIC11.39□□□□□ -0.59
AtmQ62388 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.39□□□□□ -0.59
AtmQ62388 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.39□□□□□ -0.59
AtmQ62388 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
AtmQ62388 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
AtmQ62388 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
AtmQ62388 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
AtmQ62388 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.39□□□□□ -0.59
AtmQ62388 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.39□□□□□ -0.59
AtmQ62388 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.39□□□□□ -0.59
AtmQ62388 Gm4868-201ENSMUST00000164138 789 ntBASIC11.39□□□□□ -0.59
AtmQ62388 Gm17944-201ENSMUST00000186351 643 ntBASIC11.39□□□□□ -0.59
AtmQ62388 Gm39288-201ENSMUST00000210554 446 ntBASIC11.39□□□□□ -0.59
AtmQ62388 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.39□□□□□ -0.59
AtmQ62388 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.39□□□□□ -0.59
AtmQ62388 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
AtmQ62388 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AtmQ62388 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.39□□□□□ -0.59
AtmQ62388 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms