Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Ctr9Q62018 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ctr9Q62018 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Ctr9Q62018 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.62□□□□□ -0.07
Ctr9Q62018 Gm13665-201ENSMUST00000120830 528 ntBASIC14.62□□□□□ -0.07
Ctr9Q62018 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.62□□□□□ -0.07
Ctr9Q62018 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.62□□□□□ -0.07
Ctr9Q62018 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.62□□□□□ -0.07
Ctr9Q62018 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.62□□□□□ -0.07
Ctr9Q62018 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.62□□□□□ -0.07
Ctr9Q62018 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Gm45224-201ENSMUST00000208203 414 ntBASIC14.62□□□□□ -0.07
Ctr9Q62018 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.62□□□□□ -0.07
Ctr9Q62018 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.62□□□□□ -0.07
Ctr9Q62018 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Ctr9Q62018 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.62□□□□□ -0.07
Ctr9Q62018 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.62□□□□□ -0.07
Ctr9Q62018 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ctr9Q62018 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.62□□□□□ -0.07
Ctr9Q62018 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ctr9Q62018 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ctr9Q62018 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.62□□□□□ -0.07
Ctr9Q62018 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ctr9Q62018 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Ctr9Q62018 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ctr9Q62018 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.61□□□□□ -0.07
Ctr9Q62018 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.61□□□□□ -0.07
Ctr9Q62018 Gm14644-201ENSMUST00000116671 647 ntBASIC14.61□□□□□ -0.07
Ctr9Q62018 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ctr9Q62018 Gm12997-201ENSMUST00000120207 640 ntBASIC14.61□□□□□ -0.07
Ctr9Q62018 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.61□□□□□ -0.07
Ctr9Q62018 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.61□□□□□ -0.07
Ctr9Q62018 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.61□□□□□ -0.07
Ctr9Q62018 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ctr9Q62018 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ctr9Q62018 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.61□□□□□ -0.07
Ctr9Q62018 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.61□□□□□ -0.07
Ctr9Q62018 Gm44958-201ENSMUST00000203734 736 ntBASIC14.61□□□□□ -0.07
Ctr9Q62018 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ctr9Q62018 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.61□□□□□ -0.07
Ctr9Q62018 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.61□□□□□ -0.07
Ctr9Q62018 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.61□□□□□ -0.07
Ctr9Q62018 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.61□□□□□ -0.07
Ctr9Q62018 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ctr9Q62018 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.6□□□□□ -0.07
Ctr9Q62018 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.6□□□□□ -0.07
Ctr9Q62018 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.6□□□□□ -0.07
Ctr9Q62018 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.6□□□□□ -0.07
Ctr9Q62018 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ctr9Q62018 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.6□□□□□ -0.07
Ctr9Q62018 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ctr9Q62018 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ctr9Q62018 Gm14130-201ENSMUST00000118417 987 ntBASIC14.6□□□□□ -0.07
Ctr9Q62018 Gm26361-201ENSMUST00000158868 186 ntBASIC14.6□□□□□ -0.07
Ctr9Q62018 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.6□□□□□ -0.07
Ctr9Q62018 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.6□□□□□ -0.07
Ctr9Q62018 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.6□□□□□ -0.07
Ctr9Q62018 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.6□□□□□ -0.07
Ctr9Q62018 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ctr9Q62018 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms