Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sox17Q61473 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox17Q61473 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox17Q61473 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sox17Q61473 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Sox17Q61473 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox17Q61473 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.57□□□□□ -0.56
Sox17Q61473 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sox17Q61473 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Snord83b-201ENSMUST00000104546 94 ntBASIC11.57□□□□□ -0.56
Sox17Q61473 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Gm11618-201ENSMUST00000117946 267 ntBASIC11.57□□□□□ -0.56
Sox17Q61473 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.57□□□□□ -0.56
Sox17Q61473 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.57□□□□□ -0.56
Sox17Q61473 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.57□□□□□ -0.56
Sox17Q61473 Gm22121-201ENSMUST00000175148 54 ntBASIC11.57□□□□□ -0.56
Sox17Q61473 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Mir7654-201ENSMUST00000185082 70 ntBASIC11.57□□□□□ -0.56
Sox17Q61473 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.57□□□□□ -0.56
Sox17Q61473 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.57□□□□□ -0.56
Sox17Q61473 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.57□□□□□ -0.56
Sox17Q61473 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Sox17Q61473 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox17Q61473 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.57□□□□□ -0.56
Sox17Q61473 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Sox17Q61473 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.57□□□□□ -0.56
Sox17Q61473 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sox17Q61473 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.56□□□□□ -0.56
Sox17Q61473 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Sox17Q61473 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.56□□□□□ -0.56
Sox17Q61473 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Sox17Q61473 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.56□□□□□ -0.56
Sox17Q61473 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Mir6956-201ENSMUST00000183598 62 ntBASIC11.56□□□□□ -0.56
Sox17Q61473 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.56□□□□□ -0.56
Sox17Q61473 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Sox17Q61473 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox17Q61473 Gm18473-201ENSMUST00000220543 868 ntBASIC11.56□□□□□ -0.56
Sox17Q61473 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.56□□□□□ -0.56
Sox17Q61473 Gm19220-201ENSMUST00000222682 803 ntBASIC11.56□□□□□ -0.56
Sox17Q61473 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Sox17Q61473 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.56□□□□□ -0.56
Sox17Q61473 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.56□□□□□ -0.56
Sox17Q61473 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox17Q61473 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.55□□□□□ -0.56
Sox17Q61473 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms