Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.88□□□□□ -0.35
Smarcd1Q61466 Gm14017-201ENSMUST00000121934 386 ntBASIC12.88□□□□□ -0.35
Smarcd1Q61466 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.88□□□□□ -0.35
Smarcd1Q61466 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.88□□□□□ -0.35
Smarcd1Q61466 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.88□□□□□ -0.35
Smarcd1Q61466 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcd1Q61466 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Gm11989-201ENSMUST00000117240 672 ntBASIC12.87□□□□□ -0.35
Smarcd1Q61466 Gm13996-201ENSMUST00000118456 430 ntBASIC12.87□□□□□ -0.35
Smarcd1Q61466 Gm11362-201ENSMUST00000118838 850 ntBASIC12.87□□□□□ -0.35
Smarcd1Q61466 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.87□□□□□ -0.35
Smarcd1Q61466 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.87□□□□□ -0.35
Smarcd1Q61466 Gm44262-201ENSMUST00000204969 372 ntBASIC12.87□□□□□ -0.35
Smarcd1Q61466 Gm45186-201ENSMUST00000206874 478 ntBASIC12.87□□□□□ -0.35
Smarcd1Q61466 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.87□□□□□ -0.35
Smarcd1Q61466 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.87□□□□□ -0.35
Smarcd1Q61466 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcd1Q61466 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Smarcd1Q61466 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd1Q61466 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Smarcd1Q61466 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd1Q61466 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd1Q61466 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd1Q61466 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd1Q61466 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcd1Q61466 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms