Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccne1Q61457 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.04■□□□□ 0.16
Ccne1Q61457 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Ccne1Q61457 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccne1Q61457 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccne1Q61457 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccne1Q61457 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccne1Q61457 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccne1Q61457 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccne1Q61457 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccne1Q61457 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccne1Q61457 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm11511-201ENSMUST00000118146 540 ntBASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm14724-201ENSMUST00000118400 537 ntBASIC16.03■□□□□ 0.16
Ccne1Q61457 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC16.03■□□□□ 0.16
Ccne1Q61457 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm6397-201ENSMUST00000161973 1069 ntBASIC16.03■□□□□ 0.16
Ccne1Q61457 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm18711-201ENSMUST00000199341 750 ntBASIC16.03■□□□□ 0.16
Ccne1Q61457 Mir7686-201ENSMUST00000200604 57 ntBASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm43916-201ENSMUST00000205062 967 ntBASIC16.03■□□□□ 0.16
Ccne1Q61457 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Ccne1Q61457 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm7551-201ENSMUST00000089593 1074 ntBASIC16.03■□□□□ 0.16
Ccne1Q61457 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Gm9279-201ENSMUST00000223175 1606 ntBASIC16.03■□□□□ 0.16
Ccne1Q61457 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Ccne1Q61457 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccne1Q61457 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccne1Q61457 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccne1Q61457 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccne1Q61457 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ccne1Q61457 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.02■□□□□ 0.16
Ccne1Q61457 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccne1Q61457 Gm24891-201ENSMUST00000104391 136 ntBASIC16.02■□□□□ 0.16
Ccne1Q61457 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
Ccne1Q61457 Gm12029-201ENSMUST00000120073 832 ntBASIC16.02■□□□□ 0.16
Ccne1Q61457 Gm14665-201ENSMUST00000122294 557 ntBASIC16.02■□□□□ 0.16
Ccne1Q61457 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ccne1Q61457 Gm28686-201ENSMUST00000187404 609 ntBASIC16.02■□□□□ 0.16
Ccne1Q61457 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccne1Q61457 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC16.02■□□□□ 0.16
Ccne1Q61457 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC16.02■□□□□ 0.16
Ccne1Q61457 Gm42629-201ENSMUST00000199063 1102 ntBASIC16.02■□□□□ 0.16
Ccne1Q61457 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC16.02■□□□□ 0.16
Ccne1Q61457 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccne1Q61457 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC16.02■□□□□ 0.16
Ccne1Q61457 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccne1Q61457 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ccne1Q61457 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccne1Q61457 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ccne1Q61457 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Ccne1Q61457 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Ccne1Q61457 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccne1Q61457 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccne1Q61457 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccne1Q61457 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.02■□□□□ 0.15
Ccne1Q61457 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Ccne1Q61457 Gm9129-201ENSMUST00000218173 1689 ntBASIC16.02■□□□□ 0.15
Ccne1Q61457 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccne1Q61457 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccne1Q61457 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Ccne1Q61457 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccne1Q61457 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccne1Q61457 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC16.01■□□□□ 0.15
Ccne1Q61457 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccne1Q61457 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccne1Q61457 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ccne1Q61457 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccne1Q61457 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ccne1Q61457 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.01■□□□□ 0.15
Ccne1Q61457 Gm9361-201ENSMUST00000198695 1507 ntBASIC16.01■□□□□ 0.15
Ccne1Q61457 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccne1Q61457 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccne1Q61457 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ccne1Q61457 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ccne1Q61457 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms